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EndNote

PubMed News Alert

June 21, 2004

The newly released EndNote version 8 can directly search or import data from PubMed without issue.

January 14, 2004

Due to a recent format change to the way PubMed data is tagged, EndNote users who try to save search results to a text file and import into EndNote may encounter problems. You may find that it looks as if only a single record is imported and that all data from multiple records is imported into this single record. If you try to import a text file containing a large amount of records you may get an "out of memory" error message.  This issue occurs if you use the "PubMed (NLM)" import filter that comes with EndNote v7 or earlier.

To address this change we have created a new "PubMed (NLM)" import filter.  Download the filter below for your platform and save it into the Filters subfolder located in your EndNote program folder. You may want to first delete the old "PubMed (NLM)" filter before you save the updated copy into this folder to avoid confusion. If you use the updated filter to import you should have no further difficulty. (Note that the PubMed Connect feature in EndNote v6.0.2 and 7 is not affected by these changes).

Download new "PubMed (NLM)" filter for Windows / Macintosh


October 9, 2003

Many of you are aware that the National Library of Medicine has implemented system infrastructure enhancements that have caused the PubMed (NLM) connection to fail in older versions of EndNote. Please review the appropriate notice below for an update. At this time, our latest versions, EndNote 7 (Windows and Macintosh) and EndNote 6.0.2 (Windows and Macintosh), are successfully able to connect to and search PubMed.

Notice for EndNote v6.x customers (single-user version): We have certified an update for EndNote 6, which is available at no charge from our website to all registered EndNote 6 users. This update restores the Internet Search (Connect) feature in EndNote. Download the EndNote 6.0.2 update.

Notice for EndNote v6.x Volume and Multi-copy customers: If your department or organization holds a Volume or Multi-copy license for EndNote 6, please submit your request to receive the 6.0.2 update CD at no charge by emailing us at services@adeptscience.co.uk with your serial number enclosed.

Notice for EndNote v5.x, 4.x, and 3.x users: The PubMed (NLM) connection feature in EndNote v5.x through 3.x will no longer work. If you try to use the PubMed (NLM) connection file in these versions of EndNote, you will get an error message that reads "Error searching for records. PubMed response: 301 Moved permanently..." Due to the magnitude of the engineering modifications necessary, we will not be able to provide a fix or patch for EndNote v5.x, 4.x or 3.x programs to accommodate those changes. We recommend that all v5.x, 4.x and 3.x users who rely extensively on searching PubMed through EndNote upgrade to EndNote v7.

Options for EndNote version 5.x, 4.x and 3.x users:

A) You can upgrade to v6.x and continue to utilize the "Connect" command to query PubMed directly from your EndNote. For upgrade information, please see http://www.endnote.com/en6info.asp.

B) When the PubMed changes are implemented, you will be able to browse the PubMed website and save your references into a text file that can be imported into the software. To do this:

  1. Browse to the PubMed website through an Internet browser.
  2. Enter your searches in the website (Select "Clipboard" from the "Send to" drop down menu to save records from multiple searches as you work).
  3. On the search results page, select "MEDLINE" in the dropdown menu next to the "Display" button.
  4. Choose "File" from the "Send to" drop-down menu, and then click on "Send to."
  5. Select "Save" on the following screen. In the next screen you will be able to change the file name (we recommend saving with a *.txt extension).
  6. In EndNote, open the library where you would like these references saved.
  7. Select the Import command.
  8. Make sure the File Type is set to "All Files (*.*)"
  9. Select the PubMed (NLM) filter (in EndNote) [EndNote 3: use the Medline (NLM) filter in the NLM_(Grateful_Med) folder].
  10. Click the Import button.

The text references that you downloaded from the website will be imported into your database/library. This is the procedure all EndNote users followed prior to the introduction of the Connect feature in EndNote 3. If you have any questions, please feel free to call our technical support department.

We believe the actions being undertaken at PubMed ultimately will improve the reliability of your access to PubMed in the long term and we are committed to taking advantage of these enhancements in our current program versions.


Thank you for using EndNote,

EndNote Product Team
Thomson Reuters
www.isiresearchsoft.com



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